[INFO] fetching crate hts-sys 1.10.3...
[INFO] checking hts-sys-1.10.3 against master#af3c6e733a40e671550e0f0f5aeecaa13772ba56 for pr-74989
[INFO] extracting crate hts-sys 1.10.3 into /workspace/builds/worker-4/source
[INFO] validating manifest of crates.io crate hts-sys 1.10.3 on toolchain af3c6e733a40e671550e0f0f5aeecaa13772ba56
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+af3c6e733a40e671550e0f0f5aeecaa13772ba56" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate hts-sys 1.10.3
[INFO] finished tweaking crates.io crate hts-sys 1.10.3
[INFO] tweaked toml for crates.io crate hts-sys 1.10.3 written to /workspace/builds/worker-4/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+af3c6e733a40e671550e0f0f5aeecaa13772ba56" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+af3c6e733a40e671550e0f0f5aeecaa13772ba56" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+af3c6e733a40e671550e0f0f5aeecaa13772ba56" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] b29cde639f072b7d257ace178aa21f952848ef994a0ba81d9b9304b7a1c9b05e
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "b29cde639f072b7d257ace178aa21f952848ef994a0ba81d9b9304b7a1c9b05e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b29cde639f072b7d257ace178aa21f952848ef994a0ba81d9b9304b7a1c9b05e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b29cde639f072b7d257ace178aa21f952848ef994a0ba81d9b9304b7a1c9b05e", kill_on_drop: false }`
[INFO] [stdout] b29cde639f072b7d257ace178aa21f952848ef994a0ba81d9b9304b7a1c9b05e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+af3c6e733a40e671550e0f0f5aeecaa13772ba56" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 4d9cb5e48f2d4a8f576ae068d5e95592f35bad203091e2e6fabda2c0dfd9b911
[INFO] running `Command { std: "docker" "start" "-a" "4d9cb5e48f2d4a8f576ae068d5e95592f35bad203091e2e6fabda2c0dfd9b911", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling libc v0.2.77
[INFO] [stderr]    Compiling pkg-config v0.3.18
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling jobserver v0.1.21
[INFO] [stderr]    Compiling cc v1.0.59
[INFO] [stderr]    Compiling openssl-src v111.10.2+1.1.1g
[INFO] [stderr]    Compiling libz-sys v1.1.2
[INFO] [stderr]    Compiling openssl-sys v0.9.58
[INFO] [stderr]    Compiling bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.16
[INFO] [stderr]    Compiling curl-sys v0.4.36+curl-7.71.1
[INFO] [stderr]    Compiling hts-sys v1.10.3 (/opt/rustwide/workdir)
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:44:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_net.c:30:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_internal.h:33,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_internal.h:33,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_net.c:30:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'hfile_set_blksize':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/knetfile.c: In function 'khttp_parse_url':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/knetfile.c:380:55: warning: unused parameter 'mode' [-Wunused-parameter]
[INFO] [stderr] warning:   380 | knetFile *khttp_parse_url(const char *fn, const char *mode)
[INFO] [stderr] warning:       |                                           ~~~~~~~~~~~~^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/knetfile.c: In function 'knet_dopen':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/knetfile.c:518:42: warning: unused parameter 'mode' [-Wunused-parameter]
[INFO] [stderr] warning:   518 | knetFile *knet_dopen(int fd, const char *mode)
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~~~
[INFO] [stderr] warning: cargo:warning=/opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:211:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'ptrdiff_t' {aka 'long int'} [-Wsign-compare]/opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   211 |     if (bufsiz < curr_used)
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning: cargo:warning=      |                ^      |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'hseek':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:452:35: warning: comparison of integer expressions of different signedness: 'off_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   452 |         if (offset > 0 || -offset > length) {
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_net.c: In function 'hfile_plugin_init_net':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_net.c:106:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr] warning:   106 |         { hopen_net, hfile_always_remote, "knetfile", 0 };
[INFO] [stderr] warning:       |         ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_net.c:30:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr] warning:   131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning:       |              ^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/kstring.c: In function 'kvsprintf':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/kstring.c:158:12: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   158 |  if (l + 1 > s->m - s->l) {
[INFO] [stderr] warning:       |            ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/md5.c:54:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'fd_flush':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:570:28: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr] warning:   570 | static int fd_flush(hFILE *fpv)
[INFO] [stderr] warning:       |                     ~~~~~~~^~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/header.c:37:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/header.c: In function 'sam_hrecs_error':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/header.c:59:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:    59 |     for (j = 0; j < len && line[j] != '\n'; j++)
[INFO] [stderr] warning:       |                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'mem_seek':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/header.c: In function 'check_for_name_update':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:760:30: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr] warning:   760 | static off_t mem_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning:       |                       ~~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:760:41: warning: unused parameter 'offset' [-Wunused-parameter]
[INFO] [stderr] warning:   760 | static off_t mem_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning:       |                                   ~~~~~~^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:760:53: warning: unused parameter 'whence' [-Wunused-parameter]
[INFO] [stderr] warning:   760 | static off_t mem_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning:       |                                                 ~~~~^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'mem_close':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/header.c:1493:26: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  1493 |     if        (rec->type == TYPEKEY("SQ")) {
[INFO] [stderr] warning:       |                          ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/header.c:1495:26: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  1495 |     } else if (rec->type == TYPEKEY("RG")) {
[INFO] [stderr] warning:       |                          ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/header.c:1497:26: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  1497 |     } else if (rec->type == TYPEKEY("PG")) {
[INFO] [stderr] warning:       |                          ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:766:29: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr] warning:   766 | static int mem_close(hFILE *fpv)
[INFO] [stderr] warning:       |                      ~~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'hopenv_mem':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:828:38: warning: unused parameter 'filename' [-Wunused-parameter]
[INFO] [stderr] warning:   828 | static hFILE *hopenv_mem(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning:       |                          ~~~~~~~~~~~~^~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/vcf.h:43,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/synced_bcf_reader.h:60,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bcf_sr_sort.h:37,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bcf_sr_sort.c:30:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'try_exe_add_scheme_handler':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:946:51: warning: unused parameter 'scheme' [-Wunused-parameter]
[INFO] [stderr] warning:   946 | static int try_exe_add_scheme_handler(const char *scheme,
[INFO] [stderr] warning:       |                                       ~~~~~~~~~~~~^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:947:74: warning: unused parameter 'handler' [-Wunused-parameter]
[INFO] [stderr] warning:   947 |                                       const struct hFILE_scheme_handler *handler)
[INFO] [stderr] warning:       |                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'load_hfile_plugins':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:998:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr] warning:   998 |         data = { hopen_mem, hfile_always_local, "built-in", 80 },
[INFO] [stderr] warning:       |         ^~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr] warning:   131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning:       |              ^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:999:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr] warning:   999 |         file = { hopen_fd_fileuri, hfile_always_local, "built-in", 80 },
[INFO] [stderr] warning:       |         ^~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr] warning:   131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning:       |              ^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:1000:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr] warning:  1000 |         preload = { hopen_preload, is_preload_url_remote, "built-in", 80 };
[INFO] [stderr] warning:       |         ^~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr] warning:   131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning:       |              ^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'find_scheme_handler':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:1061:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr] warning:  1061 |         { hopen_unknown_scheme, hfile_always_local, "built-in", 0 };
[INFO] [stderr] warning:       |         ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr] warning:   131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning:       |              ^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:1066:19: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:  1066 |     for (i = 0; i < sizeof scheme; i++)
[INFO] [stderr] warning:       |                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:1073:21: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:  1073 |     if (i <= 1 || i >= sizeof scheme) return NULL;
[INFO] [stderr] warning:       |                     ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'hfile_always_local':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:1107:37: warning: unused parameter 'fname' [-Wunused-parameter]
[INFO] [stderr] warning:  1107 | int hfile_always_local (const char *fname) { return 0; }
[INFO] [stderr] warning:       |                         ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c: In function 'hfile_always_remote':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile.c:1110:37: warning: unused parameter 'fname' [-Wunused-parameter]
[INFO] [stderr] warning:  1110 | int hfile_always_remote(const char *fname) { return 1; }
[INFO] [stderr] warning:       |                         ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/header.c: In function 'sam_hrecs_remove_key':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/header.c:2577:20: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  2577 |     if (type->type == TYPEKEY("SQ") && tag->str[0] == 'A' && tag->str[1] == 'N') {
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/multipart.c:34:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hfile_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/multipart.c:35:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/multipart.c: In function 'multipart_write':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/multipart.c:114:39: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr] warning:   114 | static ssize_t multipart_write(hFILE *fpv, const void *buffer, size_t nbytes)
[INFO] [stderr] warning:       |                                ~~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/multipart.c:114:56: warning: unused parameter 'buffer' [-Wunused-parameter]
[INFO] [stderr] warning:   114 | static ssize_t multipart_write(hFILE *fpv, const void *buffer, size_t nbytes)
[INFO] [stderr] warning:       |                                            ~~~~~~~~~~~~^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/multipart.c:114:71: warning: unused parameter 'nbytes' [-Wunused-parameter]
[INFO] [stderr] warning:   114 | static ssize_t multipart_write(hFILE *fpv, const void *buffer, size_t nbytes)
[INFO] [stderr] warning:       |                                                                ~~~~~~~^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/multipart.c: In function 'multipart_seek':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/multipart.c:120:36: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr] warning:   120 | static off_t multipart_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning:       |                             ~~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/multipart.c:120:47: warning: unused parameter 'offset' [-Wunused-parameter]
[INFO] [stderr] warning:   120 | static off_t multipart_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning:       |                                         ~~~~~~^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/multipart.c:120:59: warning: unused parameter 'whence' [-Wunused-parameter]
[INFO] [stderr] warning:   120 | static off_t multipart_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning:       |                                                       ~~~~^~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:48:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/faidx.c:41:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bcf_sr_sort.c: In function 'kbs_bitwise_or':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bcf_sr_sort.c:55:16: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:    55 |     for (i=0; i<dst->n; i++) dst->b[i] |= src->b[i];
[INFO] [stderr] warning:       |                ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bcf_sr_sort.c: In function 'bcf_sr_sort_set':
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/faidx.c:44:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:50:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bcf_sr_sort.c:351:17: warning: comparison of integer expressions of different signedness: 'int' and 'khint_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   351 |     for (k=0; k < kh_end(hash); k++)
[INFO] [stderr] warning:       |                 ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bcf_sr_sort.c:354:17: warning: comparison of integer expressions of different signedness: 'int' and 'khint_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   354 |     for (k=0; k < kh_end(hash); k++)
[INFO] [stderr] warning:       |                 ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bcf_sr_sort.c: In function 'bcf_sr_sort_remove_reader':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bcf_sr_sort.c:629:43: warning: unused parameter 'readers' [-Wunused-parameter]
[INFO] [stderr] warning:   629 | void bcf_sr_sort_remove_reader(bcf_srs_t *readers, sr_sort_t *srt, int i)
[INFO] [stderr] warning:       |                                ~~~~~~~~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c: In function 'bgzf_gzip_compress':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:583:101: warning: unused parameter 'level' [-Wunused-parameter]
[INFO] [stderr] warning:   583 | static int bgzf_gzip_compress(BGZF *fp, void *_dst, size_t *dlen, const void *src, size_t slen, int level)
[INFO] [stderr] warning:       |                                                                                                 ~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c: In function 'bgzf_read':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/probaln.c: In function 'probaln_glocal':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/probaln.c:179:28: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   179 |             if (u < 3 || u >= i_dim - 3) continue;
[INFO] [stderr] warning:       |                            ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/probaln.c:203:24: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   203 |         if (u < 3 || u >= i_dim - 3) continue;
[INFO] [stderr] warning:       |                        ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/probaln.c:241:28: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   241 |             if (u < 3 || u >= i_dim - 3) continue;
[INFO] [stderr] warning:       |                            ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:1113:23: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1113 |     while (bytes_read < length) {
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:1126:43: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  1126 |         copy_length = length - bytes_read < available? length - bytes_read : available;
[INFO] [stderr] warning:       |                                           ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:1126:78: warning: operand of ?: changes signedness from 'int' to 'long unsigned int' due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:  1126 |         copy_length = length - bytes_read < available? length - bytes_read : available;
[INFO] [stderr] warning:       |                                                                              ^~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c: In function 'bgzf_mt_writer':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:1289:55: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1289 |         if (hwrite(fp->fp, j->comp_data, j->comp_len) != j->comp_len)
[INFO] [stderr] warning:       |                                                       ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/faidx.c: In function 'fai_retrieve':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c: In function 'bgzf_mt':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/faidx.c:727:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'hts_pos_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr] warning:   727 |     while ( l < end - beg && (c=bgzf_getc(fai->bgzf))>=0 )
[INFO] [stderr] warning:       |               ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/faidx.c: In function 'fai_get_val':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/faidx.c:763:13: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   763 |     if (beg >= val->len) beg = val->len;
[INFO] [stderr] warning:       |             ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/faidx.c:764:13: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   764 |     if (end >= val->len) end = val->len;
[INFO] [stderr] warning:       |             ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/faidx.c: In function 'faidx_adjust_position':
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:34:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c: In function 'regidx_push':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:153:14: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'long long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:   153 |     if ( beg > MAX_COOR_0 ) beg = MAX_COOR_0;
[INFO] [stderr] warning:       |              ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:154:14: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'long long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:   154 |     if ( end > MAX_COOR_0 ) end = MAX_COOR_0;
[INFO] [stderr] warning:       |              ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:184:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   184 |         if ( mreg != list->mreg ) {
[INFO] [stderr] warning:       |                   ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/faidx.c:855:22: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'hts_pos_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr] warning:   855 |     else if(val->len <= *p_beg_i)
[INFO] [stderr] warning:       |                      ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/faidx.c:860:22: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'hts_pos_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr] warning:   860 |     else if(val->len <= *p_end_i)
[INFO] [stderr] warning:       |                      ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c: In function 'regidx_destroy':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:318:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   318 |             for (j=0; j<list->nreg; j++)
[INFO] [stderr] warning:       |                        ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c: In function 'reglist_build_index_':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:342:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   342 |             for (i=0; i<list->nreg; i++) ptr[i] = list->reg + i;
[INFO] [stderr] warning:       |                        ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:347:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   347 |             for (i=0; i<list->nreg; i++) {
[INFO] [stderr] warning:       |                        ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:358:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   358 |             for (i=0; i<list->nreg; i++) {
[INFO] [stderr] warning:       |                        ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:376:18: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   376 |         if (midx <= iend) midx = iend;
[INFO] [stderr] warning:       |                  ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:391:27: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   391 |             for (k=ibeg; k<=iend; k++)
[INFO] [stderr] warning:       |                           ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c: In function 'regidx_overlap':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:422:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   422 |         if ( ibeg >= list->nidx ) return 0;     // beg is too big
[INFO] [stderr] warning:       |                   ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:429:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   429 |             if ( iend > list->nidx ) iend = list->nidx;
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:430:27: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:1630:42: warning: unused parameter 'n_sub_blks' [-Wunused-parameter]cargo:warning=
[INFO] [stderr] warning:  1630 | int bgzf_mt(BGZF *fp, int n_threads, int n_sub_blks)
[INFO] [stderr] warning: cargo:warning=      |                           ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:432:19: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   432 |             if ( i>iend ) return 0;
[INFO] [stderr] warning:       |                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:435:28: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   435 |         for (ireg=i-1; ireg<list->nreg; ireg++)
[INFO] [stderr] warning:       |                            ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:441:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   441 |         if ( ireg >= list->nreg ) return 0;   // no match
[INFO] [stderr] warning:       |                   ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c: In function 'regidx_parse_bed':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:464:110: warning: unused parameter 'payload' [-Wunused-parameter]
[INFO] [stderr] warning:   464 | int regidx_parse_bed(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning:       |                                                                                                        ~~~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:464:125: warning: unused parameter 'usr' [-Wunused-parameter]
[INFO] [stderr] warning:   464 | int regidx_parse_bed(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning:       |                                                                                                                       ~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c: In function 'regidx_parse_tab':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:496:110: warning: unused parameter 'payload' [-Wunused-parameter]
[INFO] [stderr] warning:   496 | int regidx_parse_tab(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning:       |                                                                                                        ~~~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:496:125: warning: unused parameter 'usr' [-Wunused-parameter]
[INFO] [stderr] warning:   496 | int regidx_parse_tab(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning:       |                                                                                                                       ~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c: In function 'regidx_parse_reg':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:570:42: warning: operand of ?: changes signedness from 'hts_pos_t' {aka 'long int'} to 'long long unsigned int' due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   570 |         *end = se[0]=='-' ? MAX_COOR_0 : *beg;
[INFO] [stderr] warning:       |                                          ^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:543:110: warning: unused parameter 'payload' [-Wunused-parameter]
[INFO] [stderr] warning:   543 | int regidx_parse_reg(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning:       |                                                                                                        ~~~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:543:125: warning: unused parameter 'usr' [-Wunused-parameter]
[INFO] [stderr] warning:   543 | int regidx_parse_reg(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning:       |                                                                                                                       ~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c: In function 'regitr_overlap':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:626:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   626 |     for (i=itr->ireg; i<list->nreg; i++)
[INFO] [stderr] warning:       |                        ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:632:12: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   632 |     if ( i >= list->nreg ) return 0;   // no match
[INFO] [stderr] warning:       |            ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c: In function 'regitr_loop':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:658:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   658 |     if ( iseq >= regidx->nseq ) return 0;
[INFO] [stderr] warning:       |               ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/regidx.c:663:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   663 |         if ( iseq >= regidx->nseq ) return 0; // no more sequences, done
[INFO] [stderr] warning:       |                   ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c: In function 'bgzf_block_write':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:1870:41: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  1870 |         ublock_size = current_block + 1 < fp->idx->moffs ? fp->idx->offs[current_block+1].uaddr-fp->idx->offs[current_block].uaddr : BGZF_MAX_BLOCK_SIZE;
[INFO] [stderr] warning:       |                                         ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:1878:30: warning: comparison of integer expressions of different signedness: 'int' and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1878 |         if (fp->block_offset == ublock_size) {
[INFO] [stderr] warning:       |                              ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/vcf.h:43,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/synced_bcf_reader.h:60,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/synced_bcf_reader.c:36:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c: In function 'bgzf_useek':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:2391:22: warning: comparison of integer expressions of different signedness: 'off_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2391 |         if ( uoffset < fp->idx->offs[i].uaddr ) ihi = i - 1;
[INFO] [stderr] warning:       |                      ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/bgzf.c:2392:27: warning: comparison of integer expressions of different signedness: 'off_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2392 |         else if ( uoffset >= fp->idx->offs[i].uaddr ) ilo = i + 1;
[INFO] [stderr] warning:       |                           ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:44:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:296:43: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:296:43: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning:       |                                                            ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:47:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:49:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:50:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'bam_hdr_read':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:255:15: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   255 |     if (bytes != h->l_text) goto read_err;
[INFO] [stderr] warning:       |               ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'sam_realloc_bam_data':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:425:34: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   425 |                        b->l_data < b->m_data ? b->l_data : b->m_data);
[INFO] [stderr] warning:       |                                  ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:425:48: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   425 |                        b->l_data < b->m_data ? b->l_data : b->m_data);
[INFO] [stderr] warning:       |                                                ^~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'bam_tag2cigar':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:524:81: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   524 |     if (bam_cigar_op(cigar0[0]) != BAM_CSOFT_CLIP || bam_cigar_oplen(cigar0[0]) != c->l_qseq) return 0;
[INFO] [stderr] warning:       |                                                                                 ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:44:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'swap_data':cargo:warning=/opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:569:49: warning: unused parameter 'l_data' [-Wunused-parameter]
[INFO] [stderr] warning:   569 | static void swap_data(const bam1_core_t *c, int l_data, uint8_t *data, int is_host)
[INFO] [stderr] warning:       |                                             ~~~~^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:569:76: warning: unused parameter 'is_host' [-Wunused-parameter]
[INFO] [stderr] warning:   569 | static void swap_data(const bam1_core_t *c, int l_data, uint8_t *data, int is_host)
[INFO] [stderr] warning:       |                                                                        ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'bam_write1':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:726:32: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   726 |     return ok? 4 + block_len : -1;
[INFO] [stderr] warning:       |                                ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning:       |                                                            ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'sam_readrec':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:947:30: warning: unused parameter 'ignored' [-Wunused-parameter]
[INFO] [stderr] warning:   947 | static int sam_readrec(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning:       |                        ~~~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'sam_readrec_rest':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:962:35: warning: unused parameter 'ignored' [-Wunused-parameter]
[INFO] [stderr] warning:   962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning:       |                             ~~~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:962:70: warning: unused parameter 'tid' [-Wunused-parameter]
[INFO] [stderr] warning:   962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning:       |                                                                 ~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:962:86: warning: unused parameter 'beg' [-Wunused-parameter]
[INFO] [stderr] warning:   962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning:       |                                                                           ~~~~~~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:962:102: warning: unused parameter 'end' [-Wunused-parameter]
[INFO] [stderr] warning:   962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning:       |                                                                                           ~~~~~~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'cram_readrec':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:971:31: warning: unused parameter 'ignored' [-Wunused-parameter]
[INFO] [stderr] warning:   971 | static int cram_readrec(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning:       |                         ~~~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'cram_pseek':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:989:53: warning: unused parameter 'whence' [-Wunused-parameter]
[INFO] [stderr] warning:   989 | static int cram_pseek(void *fp, int64_t offset, int whence)
[INFO] [stderr] warning:       |                                                 ~~~~^~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'sam_hdr_write':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:1622:19: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1622 |         if (bytes != l_text)
[INFO] [stderr] warning:       |                   ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:1642:27: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1642 |                 if (bytes != fp->line.l)
[INFO] [stderr] warning:       |                           ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'old_sam_hdr_change_HD':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:1684:36: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
[INFO] [stderr] warning:  1684 |                     && strlen(val) == end - beg - 4)
[INFO] [stderr] warning:       |                                    ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:48:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'sam_parse1':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:2015:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2015 |         for (i = 0; i < c->n_cigar; ++i) {
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/tbx.c:36:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:2067:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:  2067 |         for (; i < c->l_qseq; ++i)
[INFO] [stderr] warning:       |                  ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/tbx.c:37:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:2077:38: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:  2077 |         _parse_err(s->l - (p - s->s) < c->l_qseq
[INFO] [stderr] warning:       |                                      ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:1950:40: note: in definition of macro '_parse_err'
[INFO] [stderr] warning:  1950 | #define _parse_err(cond, msg) do { if (cond) { hts_log_error(msg); goto err_ret; } } while (0)
[INFO] [stderr] warning:       |                                        ^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:1928:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:  1928 |         for (i<<=3; i < (l); ++i) {                             \
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:2080:9: note: in expansion of macro 'COPY_MINUS_N'
[INFO] [stderr] warning:  2080 |         COPY_MINUS_N(t, p, 33, c->l_qseq, failed);
[INFO] [stderr] warning:       |         ^~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils.c:31:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/realn.c: In function 'sam_cap_mapq':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'sam_state_destroy':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/realn.c:49:35: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:    49 |     for (i = y = 0, x = c->pos; i < c->n_cigar; ++i) {
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/realn.c: In function 'realn_check_tag':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/realn.c:98:24: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'const int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:    98 |     if (b->core.l_qseq != strlen((const char *) tg + 1)) {
[INFO] [stderr] warning:       |                        ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/realn.c: In function 'sam_prob_realn':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/realn.c:161:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   161 |     for (k = 0; k < c->n_cigar; ++k) {
[INFO] [stderr] warning:       |                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/realn.c:191:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   191 |         if (extend_baq && lref < c->l_qseq)
[INFO] [stderr] warning:       |                                ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:2331:21: warning: implicit declaration of function 'usleep' [-Wimplicit-function-declaration]
[INFO] [stderr] warning:  2331 |                     usleep(10000);
[INFO] [stderr] warning:       |                     ^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'update_loff':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:1667:34: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  1667 |             if ( kh_key(bidx, k) < idx->n_bins )
[INFO] [stderr] warning:       |                                  ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'compress_binning':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:1694:55: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  1694 |             if (!kh_exist(bidx, k) || kh_key(bidx, k) >= idx->n_bins || kh_key(bidx, k) < start) continue;
[INFO] [stderr] warning:       |                                                       ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'sam_parse_eof':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:2477:34: warning: unused parameter 'arg' [-Wunused-parameter]
[INFO] [stderr] warning:  2477 | static void *sam_parse_eof(void *arg) {
[INFO] [stderr] warning:       |                            ~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/realn.c:224:46: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   224 |             for (k = 0, x = c->pos, y = 0; k < c->n_cigar; ++k) {
[INFO] [stderr] warning:       |                                              ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/realn.c:251:46: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   251 |             for (k = 0, x = c->pos, y = 0; k < c->n_cigar; ++k) {
[INFO] [stderr] warning:       |                                              ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:1724:51: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  1724 |         if (!kh_exist(bidx, k) || kh_key(bidx, k) >= idx->n_bins) continue;
[INFO] [stderr] warning:       |                                                   ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils.c:35:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'idx_read_core':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:2121:60: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:  2121 |             if (bgzf_read(fp, p->list, ((size_t) p->n)<<4) != ((size_t) p->n)<<4) return -1;
[INFO] [stderr] warning:       |                                                            ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'idx_read':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:2161:33: warning: comparison of promoted ~unsigned with constant [-Wsign-compare]
[INFO] [stderr] warning:  2161 |             if (SIZE_MAX - x[2] < 1) goto fail; // Prevent possible overflow
[INFO] [stderr] warning:       |                                 ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'hts_itr_multi_bam':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:2589:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2589 |             for(j=0; j<curr_reg->count; j++) {
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'hts_itr_multi_cram':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:2701:25: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2701 |             for (j=0; j < curr_reg->count; j++) {
[INFO] [stderr] warning:       |                         ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/vcf.h:43,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/vcf_sweep.h:30,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf_sweep.c:28:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'sam_format1_append':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3010:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'const unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3010 |         for (i = 0; i < c->n_cigar; ++i) {
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: cargo:warning=/opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3125:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3125 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(*(int8_t*)s, str); ++s;}
[INFO] [stderr] warning:       |                               ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3129:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3129 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(*(uint8_t*)s, str); ++s;}
[INFO] [stderr] warning:       |                               ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3133:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3133 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(le_to_i16(s), str); s += 2; }
[INFO] [stderr] warning:       |                               ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3137:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3137 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(le_to_u16(s), str); s += 2; }
[INFO] [stderr] warning:       |                               ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3141:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3141 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(le_to_i32(s), str); s += 4; }
[INFO] [stderr] warning:       |                               ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3145:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3145 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputuw(le_to_u32(s), str); s += 4; }
[INFO] [stderr] warning:       |                               ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3149:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3149 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputd(le_to_float(s), str); s += 4; }
[INFO] [stderr] warning:       |                               ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'hts_itr_multi_next':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:3340:17: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3340 |         if (beg >  iter->off[iter->i].max) {
[INFO] [stderr] warning:       |                 ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'sam_write1':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3281:70: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3281 |                 if ( bgzf_write(fp->fp.bgzf, fp->line.s, fp->line.l) != fp->line.l ) return -1;
[INFO] [stderr] warning:       |                                                                      ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3283:67: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3283 |                 if ( hwrite(fp->fp.hfile, fp->line.s, fp->line.l) != fp->line.l ) return -1;
[INFO] [stderr] warning:       |                                                                   ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'bam_aux_append':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3367:40: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  3367 |     if (new_len > INT32_MAX || new_len < b->l_data) goto nomem;
[INFO] [stderr] warning:       |                                        ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:3347:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3347 |         for (i = ci; i < iter->reg_list[cr].count; i++) {
[INFO] [stderr] warning:       |                        ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'idx_test_and_fetch':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:3429:49: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  3429 |                 if (fwrite(buf, 1, l, local_fp) != l) {
[INFO] [stderr] warning:       |                                                 ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf_sweep.c: In function 'bcf_sweep_fwd':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf_sweep.c:169:53: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   169 |         if ( !sw->nidx || pos - sw->idx[sw->nidx-1] > sw->block_size )
[INFO] [stderr] warning:       |                                                     ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'hts_realloc_or_die':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:3740:62: warning: unused parameter 'func' [-Wunused-parameter]
[INFO] [stderr] warning:  3740 |                           int clear, void **ptr, const char *func) {
[INFO] [stderr] warning:       |                                                  ~~~~~~~~~~~~^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'hts_log':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:3891:18: warning: comparison of integer expressions of different signedness: 'enum htsLogLevel' and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  3891 |     if (severity <= hts_verbose) {
[INFO] [stderr] warning:       |                  ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/vcf.h:43,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/vcfutils.h:29,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcfutils.c:29:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/vcf.h:43,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:40:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'hts_opt_add':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:778:38: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   778 |         case 'g': case 'G': o->val.i *= 1024;
[INFO] [stderr] warning:       |                             ~~~~~~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:779:9: note: here
[INFO] [stderr] warning:   779 |         case 'm': case 'M': o->val.i *= 1024;
[INFO] [stderr] warning:       |         ^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:779:38: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   779 |         case 'm': case 'M': o->val.i *= 1024;
[INFO] [stderr] warning:       |                             ~~~~~~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:780:9: note: here
[INFO] [stderr] warning:   780 |         case 'k': case 'K': o->val.i *= 1024; break;
[INFO] [stderr] warning:       |         ^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'resolve_cigar2':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3980:52: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3980 |             for (k = 0, s->x = c->pos, s->y = 0; k < c->n_cigar; ++k) {
[INFO] [stderr] warning:       |                                                    ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3898:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3987:22: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3987 |             assert(k < c->n_cigar);
[INFO] [stderr] warning:       |                      ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3993:25: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3993 |             assert(s->k < c->n_cigar); // otherwise a bug: this function should not be called in this case
[INFO] [stderr] warning:       |                         ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4002:38: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4002 |                 for (k = s->k + 1; k < c->n_cigar; ++k) {
[INFO] [stderr] warning:       |                                      ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:3898:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4009:25: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4009 |             assert(s->k < c->n_cigar); // otherwise a bug
[INFO] [stderr] warning:       |                         ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:43:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4016:45: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4016 |         if (s->x + l - 1 == pos && s->k + 1 < c->n_cigar) { // peek the next operation
[INFO] [stderr] warning:       |                                             ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4021:50: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4021 |             else if (op2 == BAM_CPAD && s->k + 2 < c->n_cigar) { // no working for adjacent padding
[INFO] [stderr] warning:       |                                                  ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4023:38: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4023 |                 for (k = s->k + 2; k < c->n_cigar; ++k) {
[INFO] [stderr] warning:       |                                      ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'bam_plp_insertion':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4073:14: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4073 |     while (k < p->b->core.n_cigar) {
[INFO] [stderr] warning:       |              ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4093:14: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4093 |     while (k < p->b->core.n_cigar) {
[INFO] [stderr] warning:       |              ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4097:27: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4097 |             for (l = 0; l < (cigar[k]>>BAM_CIGAR_SHIFT); l++)
[INFO] [stderr] warning:       |                           ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4101:27: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4101 |             for (l = 0; l < (cigar[k]>>BAM_CIGAR_SHIFT); l++, j++) {
[INFO] [stderr] warning:       |                           ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:44:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c: In function 'hts_itr_multi_bam':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:2572:36: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:  2572 |                     iter->finished = 1;
[INFO] [stderr] warning:       |                     ~~~~~~~~~~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts.c:2573:17: note: here
[INFO] [stderr] warning:  2573 |                 case HTS_IDX_START:
[INFO] [stderr] warning:       |                 ^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_hdr_add_sample_len':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:119:45: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   119 |     while ( *ss && isspace_c(*ss) && ss - s < len) ss++;
[INFO] [stderr] warning:       |                                             ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:120:25: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   120 |     if ( !*ss || ss - s == len)
[INFO] [stderr] warning:       |                         ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_hdr_sync':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:190:22: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'khint_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   190 |         if ( h->n[i] < kh_size(d) )
[INFO] [stderr] warning:       |                      ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c: In function 'bam_mplp64_auto':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4672:30: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4672 |             if (iter->tid[i] < new_min_tid) {
[INFO] [stderr] warning:       |                              ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/sam.c:4675:37: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  4675 |             } else if (iter->tid[i] == new_min_tid && iter->pos[i] < new_min_pos) {
[INFO] [stderr] warning:       |                                     ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_hdr_parse_line':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:393:49: warning: unused parameter 'h' [-Wunused-parameter]
[INFO] [stderr] warning:   393 | bcf_hrec_t *bcf_hdr_parse_line(const bcf_hdr_t *h, const char *line, int *len)
[INFO] [stderr] warning:       |                                ~~~~~~~~~~~~~~~~~^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/vcf.h:40,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:40:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_hdr_set_idx':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts.h:168:12: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   168 |     ((num) > (*(size_ptr))                                  \
[INFO] [stderr] warning:       |            ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:507:9: note: in expansion of macro 'hts_resize'
[INFO] [stderr] warning:   507 |     if (hts_resize(bcf_idpair_t, new_n, &hdr->m[dict_type],
[INFO] [stderr] warning:       |         ^~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_hdr_register_hrec':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:647:18: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   647 |         if (type == -1) {
[INFO] [stderr] warning:       |                  ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:652:17: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   652 |         if (var == -1) {
[INFO] [stderr] warning:       |                 ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_hdr_printf':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:967:11: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:   967 |     if (n >= sizeof(tmp)) {
[INFO] [stderr] warning:       |           ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_hdr_read':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1108:35: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1108 |     if (bgzf_read(fp, htxt, hlen) != hlen) goto fail;
[INFO] [stderr] warning:       |                                   ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_hdr_write':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1147:41: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1147 |     if ( bgzf_write(fp, htxt.s, htxt.l) != htxt.l ) return -1;
[INFO] [stderr] warning:       |                                         ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_read1_core':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1242:49: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1242 |     if (bgzf_read(fp, v->shared.s, v->shared.l) != v->shared.l) return -2;
[INFO] [stderr] warning:       |                                                 ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1243:47: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1243 |     if (bgzf_read(fp, v->indiv.s, v->indiv.l) != v->indiv.l) return -2;
[INFO] [stderr] warning:       |                                               ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_record_check':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1342:19: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1342 |     if (end - ptr < bytes) goto bad_shared;
[INFO] [stderr] warning:       |                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1355:23: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1355 |         if (end - ptr < bytes) goto bad_shared;
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1367:27: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1367 |             if (end - ptr < bytes) goto bad_shared;
[INFO] [stderr] warning:       |                           ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1370:27: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1370 |             if (end - ptr < bytes) goto bad_shared;
[INFO] [stderr] warning:       |                           ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1371:27: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  1371 |             for (i = 0; i < num; i++) {
[INFO] [stderr] warning:       |                           ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1400:23: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1400 |         if (end - ptr < bytes) goto bad_shared;
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1423:23: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1423 |         if (end - ptr < bytes) goto bad_indiv;
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_readrec':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1491:33: warning: unused parameter 'null' [-Wunused-parameter]
[INFO] [stderr] warning:  1491 | int bcf_readrec(BGZF *fp, void *null, void *vv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning:       |                           ~~~~~~^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_write':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1778:51: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1778 |     if ( bgzf_write(fp, v->shared.s, v->shared.l) != v->shared.l ) return -1;
[INFO] [stderr] warning:       |                                                   ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:1779:49: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1779 |     if ( bgzf_write(fp, v->indiv.s, v->indiv.l) != v->indiv.l ) return -1;
[INFO] [stderr] warning:       |                                                 ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'vcf_parse_format':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:2300:34: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  2300 |                 if (fmt[j].max_l < l) fmt[j].max_l = l;
[INFO] [stderr] warning:       |                                  ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_external.c:44:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:2331:33: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:  2331 |             f->size = f->is_gt? f->max_g << 2 : f->max_l;
[INFO] [stderr] warning:       |                                 ^~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_external.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:296:43: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_external.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning:       |                                                            ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_external.c: In function 'cram_transcode_rg':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_external.c:302:37: warning: unused parameter 'in_rg' [-Wunused-parameter]
[INFO] [stderr] warning:   302 |                       int nrg, int *in_rg, int *out_rg) {
[INFO] [stderr] warning:       |                                ~~~~~^~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_index.c:66:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_index.c:67:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:296:43: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning:       |                                                            ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'get_one_bits_MSB':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:80:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:    80 |     if (block->byte >= block->uncomp_size)
[INFO] [stderr] warning:       |                     ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:87:29: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:    87 |             if (block->byte == block->uncomp_size && (b&1))
[INFO] [stderr] warning:       |                             ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'get_zero_bits_MSB':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:98:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:    98 |     if (block->byte >= block->uncomp_size)
[INFO] [stderr] warning:       |                     ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:105:29: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   105 |             if (block->byte == block->uncomp_size && !(b&1))
[INFO] [stderr] warning:       |                             ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_external_decode_int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:316:42: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:   316 |                              cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_external_decode_long':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'vcf_write_line':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:3061:15: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3061 |     return ret==line->l ? 0 : -1;
[INFO] [stderr] warning:       |               ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'vcf_write':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:3084:15: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3084 |     return ret==fp->line.l ? 0 : -1;
[INFO] [stderr] warning:       |               ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'idx_calc_n_lvls_ids':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:3115:22: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long int'} and 'uint64_t' {aka 'const long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3115 |         if ( max_len < h->id[BCF_DT_CTG][i].val->info[0] )
[INFO] [stderr] warning:       |                      ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:51:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:296:43: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:336:43: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:   336 |                               cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                               ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_external_decode_char':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:356:43: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:   356 |                               cram_block *in, char *out,
[INFO] [stderr] warning:       |                               ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_external_decode_block':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:376:51: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:   376 |                                       cram_block *in, char *out_,
[INFO] [stderr] warning:       |                                       ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_external_decode_init':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:405:43: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:   405 |                                       int version) {
[INFO] [stderr] warning:       |                                       ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_external_encode_int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:441:42: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   441 | int cram_external_encode_int(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:442:44: warning: unused parameter 'in_size' [-Wunused-parameter]
[INFO] [stderr] warning:   442 |                              char *in, int in_size) {
[INFO] [stderr] warning:       |                                        ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_external_encode_long':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:448:43: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   448 | int cram_external_encode_long(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                               ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:449:44: warning: unused parameter 'in_size' [-Wunused-parameter]
[INFO] [stderr] warning:   449 |                              char *in, int in_size) {
[INFO] [stderr] warning:       |                                        ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_external_encode_char':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:456:43: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   456 | int cram_external_encode_char(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                               ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_external_encode_store':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:472:36: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:   472 |                                int version) {
[INFO] [stderr] warning:       |                                ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_external_encode_init':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:495:51: warning: unused parameter 'st' [-Wunused-parameter]
[INFO] [stderr] warning:   495 | cram_codec *cram_external_encode_init(cram_stats *st,
[INFO] [stderr] warning:       |                                       ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:498:43: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:   498 |                                       int version) {
[INFO] [stderr] warning:       |                                       ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_beta_decode_long':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:525:39: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   525 | int cram_beta_decode_long(cram_slice *slice, cram_codec *c, cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                           ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_beta_decode_int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:543:38: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   543 | int cram_beta_decode_int(cram_slice *slice, cram_codec *c, cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                          ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_beta_decode_char':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:561:39: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   561 | int cram_beta_decode_char(cram_slice *slice, cram_codec *c, cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                           ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:296:43: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_beta_decode_init':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:618:51: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:   618 |         || c->u.beta.nbits < 0 || c->u.beta.nbits > 8 * sizeof(int)) {
[INFO] [stderr] warning:       |                                                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:591:39: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:   591 |                                   int version) {
[INFO] [stderr] warning:       |                                   ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_beta_encode_store':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:628:46: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:   628 |                            char *prefix, int version) {
[INFO] [stderr] warning:       |                                          ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_beta_encode_long':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:650:39: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   650 | int cram_beta_encode_long(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                           ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_beta_encode_int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:662:38: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   662 | int cram_beta_encode_int(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                          ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_beta_encode_char':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:674:39: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   674 | int cram_beta_encode_char(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                           ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning:       |                                                            ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/os.h:80,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:47:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_beta_encode_init':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:693:39: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:   693 |                                   int version) {
[INFO] [stderr] warning:       |                                   ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_hdr_set_samples':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_subexp_decode':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:757:36: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   757 | int cram_subexp_decode(cram_slice *slice, cram_codec *c, cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                        ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_subexp_decode_init':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:808:41: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:   808 |                                     int version) {
[INFO] [stderr] warning:       |                                     ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_gamma_decode':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:841:35: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   841 | int cram_gamma_decode(cram_slice *slice, cram_codec *c, cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                       ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_gamma_decode_init':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:872:40: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:   872 |                                    int version) {
[INFO] [stderr] warning:       |                                    ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_decode_null':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:928:42: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   928 | int cram_huffman_decode_null(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:928:61: warning: unused parameter 'c' [-Wunused-parameter]
[INFO] [stderr] warning:   928 | int cram_huffman_decode_null(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                                                 ~~~~~~~~~~~~^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:929:42: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:   929 |                              cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:929:52: warning: unused parameter 'out' [-Wunused-parameter]
[INFO] [stderr] warning:   929 |                              cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                                              ~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:929:62: warning: unused parameter 'out_size' [-Wunused-parameter]
[INFO] [stderr] warning:   929 |                              cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                                                         ~~~~~^~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_decode_char0':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:933:43: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   933 | int cram_huffman_decode_char0(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                               ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:934:43: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:   934 |                               cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                               ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_decode_char':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:947:42: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   947 | int cram_huffman_decode_char(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_decode_int0':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:982:42: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   982 | int cram_huffman_decode_int0(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:983:42: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:   983 |                              cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_decode_int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:995:41: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:   995 | int cram_huffman_decode_int(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                             ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_decode_long0':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1032:43: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:  1032 | int cram_huffman_decode_long0(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                               ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1033:43: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:  1033 |                               cram_block *in, char *out, int *out_size) {
[INFO] [stderr] warning:       |                               ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_decode_long':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1045:42: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:  1045 | int cram_huffman_decode_long(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_decode_init':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1107:16: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:  1107 |     if (ncodes >= SIZE_MAX / sizeof(*codes)) {
[INFO] [stderr] warning:       |                ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:51:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning:       |                                                            ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/os.h:80,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:52:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:3736:19: warning: comparison of integer expressions of different signedness: 'int' and 'khint_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3736 |             if (k < kh_end(d)) kh_del(vdict, d, k);
[INFO] [stderr] warning:       |                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:3740:33: warning: comparison of integer expressions of different signedness: 'int' and 'khint_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  3740 |         for (k = kh_begin(d); k != kh_end(d); ++k)
[INFO] [stderr] warning:       |                                 ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_subset':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:3755:33: warning: unused parameter 'h' [-Wunused-parameter]
[INFO] [stderr] warning:  3755 | int bcf_subset(const bcf_hdr_t *h, bcf1_t *v, int n, int *imap)
[INFO] [stderr] warning:       |                ~~~~~~~~~~~~~~~~~^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1183:17: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1183 |         if (val > max_val)
[INFO] [stderr] warning:       |                 ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1087:42: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:  1087 |                                      int version) {
[INFO] [stderr] warning:       |                                      ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_encode_char0':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1251:43: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:  1251 | int cram_huffman_encode_char0(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                               ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1251:62: warning: unused parameter 'c' [-Wunused-parameter]
[INFO] [stderr] warning:  1251 | int cram_huffman_encode_char0(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                                                  ~~~~~~~~~~~~^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1252:37: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:  1252 |                               char *in, int in_size) {
[INFO] [stderr] warning:       |                               ~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1252:45: warning: unused parameter 'in_size' [-Wunused-parameter]
[INFO] [stderr] warning:  1252 |                               char *in, int in_size) {
[INFO] [stderr] warning:       |                                         ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_encode_char':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1256:42: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:  1256 | int cram_huffman_encode_char(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_encode_int0':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1287:42: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:  1287 | int cram_huffman_encode_int0(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1287:61: warning: unused parameter 'c' [-Wunused-parameter]
[INFO] [stderr] warning:  1287 | int cram_huffman_encode_int0(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                                                 ~~~~~~~~~~~~^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1288:36: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:  1288 |                              char *in, int in_size) {
[INFO] [stderr] warning:       |                              ~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1288:44: warning: unused parameter 'in_size' [-Wunused-parameter]
[INFO] [stderr] warning:  1288 |                              char *in, int in_size) {
[INFO] [stderr] warning:       |                                        ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_encode_int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1292:41: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:  1292 | int cram_huffman_encode_int(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                             ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_encode_long0':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1324:43: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:  1324 | int cram_huffman_encode_long0(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                               ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1324:62: warning: unused parameter 'c' [-Wunused-parameter]
[INFO] [stderr] warning:  1324 | int cram_huffman_encode_long0(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                                                  ~~~~~~~~~~~~^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1325:37: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:  1325 |                               char *in, int in_size) {
[INFO] [stderr] warning:       |                               ~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1325:45: warning: unused parameter 'in_size' [-Wunused-parameter]
[INFO] [stderr] warning:  1325 |                               char *in, int in_size) {
[INFO] [stderr] warning:       |                                         ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c: In function 'cram_decode_TD':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_encode_long':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1329:42: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:  1329 | int cram_huffman_encode_long(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                              ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_encode_store':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1375:35: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:  1375 |                               int version) {
[INFO] [stderr] warning:       |                               ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_huffman_encode_init':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1431:44: warning: unused parameter 'dat' [-Wunused-parameter]
[INFO] [stderr] warning:  1431 |                                      void *dat,
[INFO] [stderr] warning:       |                                      ~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1432:42: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:  1432 |                                      int version) {
[INFO] [stderr] warning:       |                                      ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_byte_array_len_encode_init':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1777:69: warning: unused parameter 'option' [-Wunused-parameter]
[INFO] [stderr] warning:  1777 |                                             enum cram_external_type option,
[INFO] [stderr] warning:       |                                             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_compress_slice':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:820:61: warning: unused parameter 'c' [-Wunused-parameter]
[INFO] [stderr] warning:   820 | static int cram_compress_slice(cram_fd *fd, cram_container *c, cram_slice *s) {
[INFO] [stderr] warning:       |                                             ~~~~~~~~~~~~~~~~^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_encode_slice':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:1093:21: warning: comparison of integer expressions of different signedness: 'enum cram_DS_ID' and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:  1093 |     for (id = 1; id < s->hdr->num_blocks; id++) {
[INFO] [stderr] warning:       |                     ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_byte_array_stop_decode_char':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1814:57: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:  1814 |                                             cram_block *in, char *out,
[INFO] [stderr] warning:       |                                             ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:111:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   111 |     for (nTL = i = 0; i < BLOCK_SIZE(b); i++) {
[INFO] [stderr] warning:       |                         ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:122:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   122 |     for (nTL = i = 0; i < BLOCK_SIZE(b); i++) {
[INFO] [stderr] warning:       |                         ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c: In function 'cram_decode_compression_header':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:185:32: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:   185 |             hdr->num_landmarks >= SIZE_MAX / sizeof(int32_t) ||
[INFO] [stderr] warning:       |                                ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_byte_array_stop_decode_block':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1868:21: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1868 |     if (cp_end - cp < out->alloc - out->byte) {
[INFO] [stderr] warning:       |                     ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1850:51: warning: unused parameter 'in' [-Wunused-parameter]
[INFO] [stderr] warning:  1850 |                                       cram_block *in, char *out_,
[INFO] [stderr] warning:       |                                       ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_byte_array_stop_encode':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1943:45: warning: unused parameter 'slice' [-Wunused-parameter]
[INFO] [stderr] warning:  1943 | int cram_byte_array_stop_encode(cram_slice *slice, cram_codec *c,
[INFO] [stderr] warning:       |                                 ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'cram_byte_array_stop_encode_init':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1994:58: warning: unused parameter 'st' [-Wunused-parameter]
[INFO] [stderr] warning:  1994 | cram_codec *cram_byte_array_stop_encode_init(cram_stats *st,
[INFO] [stderr] warning:       |                                              ~~~~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1995:70: warning: unused parameter 'option' [-Wunused-parameter]
[INFO] [stderr] warning:  1995 |                                              enum cram_external_type option,
[INFO] [stderr] warning:       |                                              ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:1997:50: warning: unused parameter 'version' [-Wunused-parameter]
[INFO] [stderr] warning:  1997 |                                              int version) {
[INFO] [stderr] warning:       |                                              ~~~~^~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'lossy_read_names':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:1220:28: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1220 |             if (u.counts.e != e) {
[INFO] [stderr] warning:       |                            ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:1250:30: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  1250 |         if (kh_val(names, k) == -1)
[INFO] [stderr] warning:       |                              ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:36:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_encode_container':
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_index.c:68:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:296:43: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c: In function 'get_bits_MSB':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:154:106: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   154 | #define GET_BIT_MSB(b,v) (void)(v<<=1, v|=(b->data[b->byte] >> b->bit)&1, b->byte += (--b->bit<0), b->bit&=7)
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:212:14: note: in expansion of macro 'GET_BIT_MSB'
[INFO] [stderr] warning:   212 |     case  8: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |              ^~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:213:5: note: here
[INFO] [stderr] warning:   213 |     case  7: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:154:106: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   154 | #define GET_BIT_MSB(b,v) (void)(v<<=1, v|=(b->data[b->byte] >> b->bit)&1, b->byte += (--b->bit<0), b->bit&=7)
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:213:14: note: in expansion of macro 'GET_BIT_MSB'
[INFO] [stderr] warning:   213 |     case  7: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |              ^~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:214:5: note: here
[INFO] [stderr] warning:   214 |     case  6: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:154:106: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   154 | #define GET_BIT_MSB(b,v) (void)(v<<=1, v|=(b->data[b->byte] >> b->bit)&1, b->byte += (--b->bit<0), b->bit&=7)
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:214:14: note: in expansion of macro 'GET_BIT_MSB'
[INFO] [stderr] warning:   214 |     case  6: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |              ^~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:215:5: note: here
[INFO] [stderr] warning:   215 |     case  5: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:154:106: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   154 | #define GET_BIT_MSB(b,v) (void)(v<<=1, v|=(b->data[b->byte] >> b->bit)&1, b->byte += (--b->bit<0), b->bit&=7)
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:215:14: note: in expansion of macro 'GET_BIT_MSB'
[INFO] [stderr] warning:   215 |     case  5: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |              ^~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:216:5: note: here
[INFO] [stderr] warning:   216 |     case  4: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:154:106: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   154 | #define GET_BIT_MSB(b,v) (void)(v<<=1, v|=(b->data[b->byte] >> b->bit)&1, b->byte += (--b->bit<0), b->bit&=7)
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:216:14: note: in expansion of macro 'GET_BIT_MSB'
[INFO] [stderr] warning:   216 |     case  4: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |              ^~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:217:5: note: here
[INFO] [stderr] warning:   217 |     case  3: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:154:106: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   154 | #define GET_BIT_MSB(b,v) (void)(v<<=1, v|=(b->data[b->byte] >> b->bit)&1, b->byte += (--b->bit<0), b->bit&=7)
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:217:14: note: in expansion of macro 'GET_BIT_MSB'
[INFO] [stderr] warning:   217 |     case  3: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |              ^~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:218:5: note: here
[INFO] [stderr] warning:   218 |     case  2: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:154:106: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   154 | #define GET_BIT_MSB(b,v) (void)(v<<=1, v|=(b->data[b->byte] >> b->bit)&1, b->byte += (--b->bit<0), b->bit&=7)
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:218:14: note: in expansion of macro 'GET_BIT_MSB'
[INFO] [stderr] warning:   218 |     case  2: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |              ^~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.c:219:5: note: here
[INFO] [stderr] warning:   219 |     case  1: GET_BIT_MSB(block, val);
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c: In function 'cram_dependent_data_series':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:683:23: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:   683 |         for (i = 0; i < sizeof(i_to_id)/sizeof(*i_to_id); i++) {
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:777:23: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:   777 |         for (i = 0; i < sizeof(i_to_id)/sizeof(*i_to_id); i++) {
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c: In function 'cram_ds_unique':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:876:72: warning: unused parameter 'c' [-Wunused-parameter]
[INFO] [stderr] warning:   876 | static int cram_ds_unique(cram_block_compression_hdr *hdr, cram_codec *c,
[INFO] [stderr] warning:       |                                                            ~~~~~~~~~~~~^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:1457:34: warning: comparison of integer expressions of different signedness: 'int' and 'khint_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  1457 |             assert(s->naux_block <= c->tags_used->n_occupied);
[INFO] [stderr] warning:       |                                  ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_update_filter':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:4128:40: warning: unused parameter 'hdr' [-Wunused-parameter]
[INFO] [stderr] warning:  4128 | int bcf_update_filter(const bcf_hdr_t *hdr, bcf1_t *line, int *flt_ids, int n)
[INFO] [stderr] warning:       |                       ~~~~~~~~~~~~~~~~~^~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_index.c:68:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning:       |                                                            ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/os.h:80,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_index.c:69:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_add_filter':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:4141:37: warning: unused parameter 'hdr' [-Wunused-parameter]
[INFO] [stderr] warning:  4141 | int bcf_add_filter(const bcf_hdr_t *hdr, bcf1_t *line, int flt_id)
[INFO] [stderr] warning:       |                    ~~~~~~~~~~~~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c: In function 'cram_decode_slice_header':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_add_bases':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:1927:36: warning: unused parameter 'fd' [-Wunused-parameter]
[INFO] [stderr] warning:  1927 | static int cram_add_bases(cram_fd *fd, cram_container *c,
[INFO] [stderr] warning:       |                           ~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_add_base':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:1940:35: warning: unused parameter 'fd' [-Wunused-parameter]
[INFO] [stderr] warning:  1940 | static int cram_add_base(cram_fd *fd, cram_container *c,
[INFO] [stderr] warning:       |                          ~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_add_quality':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:1957:38: warning: unused parameter 'fd' [-Wunused-parameter]
[INFO] [stderr] warning:  1957 | static int cram_add_quality(cram_fd *fd, cram_container *c,
[INFO] [stderr] warning:       |                             ~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_add_deletion':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:1973:54: warning: unused parameter 'base' [-Wunused-parameter]
[INFO] [stderr] warning:  1973 |                              int pos, int len, char *base) {
[INFO] [stderr] warning:       |                                                ~~~~~~^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_add_hardclip':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2019:54: warning: unused parameter 'base' [-Wunused-parameter]
[INFO] [stderr] warning:  2019 |                              int pos, int len, char *base) {
[INFO] [stderr] warning:       |                                                ~~~~~~^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_add_skip':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2029:50: warning: unused parameter 'base' [-Wunused-parameter]
[INFO] [stderr] warning:  2029 |                          int pos, int len, char *base) {
[INFO] [stderr] warning:       |                                            ~~~~~~^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_add_pad':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2039:49: warning: unused parameter 'base' [-Wunused-parameter]
[INFO] [stderr] warning:  2039 |                         int pos, int len, char *base) {
[INFO] [stderr] warning:       |                                           ~~~~~~^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_index.c: In function 'cram_index_container':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_index.c:652:37: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   652 |         if (spos - cpos - c->offset != c->landmark[j]) {
[INFO] [stderr] warning:       |                                     ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_encode_aux_1_0':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2081:43: warning: unused parameter 'fd' [-Wunused-parameter]
[INFO] [stderr] warning:  2081 | static char *cram_encode_aux_1_0(cram_fd *fd, bam_seq_t *b, cram_container *c,
[INFO] [stderr] warning:       |                                  ~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:1005:30: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:  1005 |         hdr->num_content_ids >= SIZE_MAX / sizeof(int32_t)) {
[INFO] [stderr] warning:       |                              ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_stats.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:296:43: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_stats.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning:       |                                                            ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/os.h:80,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_stats.c:46:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_stats.c: In function 'cram_stats_encoding':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_stats.c:134:49: warning: unused parameter 'fd' [-Wunused-parameter]
[INFO] [stderr] warning:   134 | enum cram_encoding cram_stats_encoding(cram_fd *fd, cram_stats *st) {
[INFO] [stderr] warning:       |                                        ~~~~~~~~~^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function '_bcf1_sync_alleles':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:4207:29: warning: operand of ?: changes signedness from 'long int' to 'size_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:  4207 |     line->rlen = end_info ? end_info->v1.i - line->pos : strlen(line->d.allele[0]);
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_update_id':
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_samtools.c:38:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:296:43: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'process_one_read':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2815:39: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2815 |         while (cr->cigar + cr->ncigar >= s->cigar_alloc) {
[INFO] [stderr] warning:       |                                       ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2900:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2900 |                 if (l < cig_len && cr->len) {
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2908:38: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2908 |                             for (; l < cig_len && seq[spos]; l++, spos++) {
[INFO] [stderr] warning:       |                                      ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2917:34: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2917 |                         for (; l < cig_len && seq[spos]; l++, spos++) {
[INFO] [stderr] warning:       |                                  ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2961:35: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2961 |                     for (l = 0; l < cig_len; l++, spos++) {
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2979:39: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2979 |                         for (l = 0; l < cig_len; l++, spos++) {
[INFO] [stderr] warning:       |                                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:2983:39: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2983 |                         for (l = 0; l < cig_len; l++, spos++) {
[INFO] [stderr] warning:       |                                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:4255:36: warning: unused parameter 'hdr' [-Wunused-parameter]
[INFO] [stderr] warning:  4255 | int bcf_update_id(const bcf_hdr_t *hdr, bcf1_t *line, const char *id)
[INFO] [stderr] warning:       |                   ~~~~~~~~~~~~~~~~~^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_add_id':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:4268:33: warning: unused parameter 'hdr' [-Wunused-parameter]
[INFO] [stderr] warning:  4268 | int bcf_add_id(const bcf_hdr_t *hdr, bcf1_t *line, const char *id)
[INFO] [stderr] warning:       |                ~~~~~~~~~~~~~~~~~^~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_samtools.c:38:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning:       |                                                            ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/os.h:80,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/mFILE.c:45:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/mFILE.c: In function 'mfload':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/mFILE.c:112:47: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and '__off_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr] warning:   112 |     } while (!feof(fp) && (fn == NULL || used < sb.st_size));
[INFO] [stderr] warning:       |                                               ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/mFILE.c:75:65: warning: unused parameter 'binary' [-Wunused-parameter]
[INFO] [stderr] warning:    75 | static char *mfload(FILE *fp, const char *fn, size_t *size, int binary) {
[INFO] [stderr] warning:       |                                                             ~~~~^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c: In function 'cram_put_bam_seq':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:3304:25: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  3304 |         (c->s_num_bases >= fd->bases_per_slice)) {
[INFO] [stderr] warning:       |                         ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_encode.c:3337:28: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  3337 |             c->s_num_bases >= fd->bases_per_slice) {
[INFO] [stderr] warning:       |                            ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/mFILE.c: In function 'mftruncate':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/mFILE.c:489:31: warning: operand of ?: changes signedness from 'long int' to 'size_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   489 |     mf->size = offset != -1 ? offset : mf->offset;
[INFO] [stderr] warning:       |                               ^~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c: In function 'cram_decode_slice':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_decode.c:2333:20: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:  2333 |                 bf >= sizeof(fd->bam_flag_swap)/sizeof(*fd->bam_flag_swap))
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c: In function 'bcf_get_format_values':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/vcf.c:4465:53: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
[INFO] [stderr] warning:  4465 |     else if ( bcf_hdr_id2type(hdr,BCF_HL_FMT,tag_id)!=type ) return -2;     // expected different type
[INFO] [stderr] warning:       |                                                     ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:73:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:296:43: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:52,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:73:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning:       |                                                            ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/os.h:80,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:74:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:90:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c: In function 'rans_compress_O0':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:88:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:    88 |     for (i = 0; i < in_size; i++) {
[INFO] [stderr] warning:       |                   ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c: In function 'rans_compress_O1':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/os.h:80,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/open_trace_file.c:75:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:395:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:   395 |     for (last_i=i=0; i<in_size; i++) {
[INFO] [stderr] warning:       |                       ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c: In function 'rans_uncompress_O1':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:752:18: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:   752 |     for (; i4[3] < out_sz; i4[3]++) {
[INFO] [stderr] warning:       |                  ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c: In function 'rans_compress_O0':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:160:13: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   160 |     case 3: RansEncPutSymbol(&rans2, &ptr, &syms[in[in_size-(i-2)]]);
[INFO] [stderr] warning:       |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:161:5: note: here
[INFO] [stderr] warning:   161 |     case 2: RansEncPutSymbol(&rans1, &ptr, &syms[in[in_size-(i-1)]]);
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:161:13: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   161 |     case 2: RansEncPutSymbol(&rans1, &ptr, &syms[in[in_size-(i-1)]]);
[INFO] [stderr] warning:       |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:162:5: note: here
[INFO] [stderr] warning:   162 |     case 1: RansEncPutSymbol(&rans0, &ptr, &syms[in[in_size-(i-0)]]);
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c: In function 'rans_uncompress_O0':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:350:28: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   350 |         out_buf[out_end+2] = D.R[RansDecGet(&R[2], TF_SHIFT)];
[INFO] [stderr] warning:       |         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:351:5: note: here
[INFO] [stderr] warning:   351 |     case 2:
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:352:28: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning:   352 |         out_buf[out_end+1] = D.R[RansDecGet(&R[1], TF_SHIFT)];
[INFO] [stderr] warning:       |         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/rANS_static.c:353:5: note: here
[INFO] [stderr] warning:   353 |     case 1:
[INFO] [stderr] warning:       |     ^~~~
[INFO] [stderr] warning: In file included from htslib/hfile_internal.h:31,
[INFO] [stderr] warning:                  from htslib/hfile_libcurl.c:39:
[INFO] [stderr] warning: htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/open_trace_file.c:82:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning:       |                                   ^
[INFO] [stderr] warning: In file included from htslib/hfile_internal.h:33,
[INFO] [stderr] warning:                  from htslib/hfile_libcurl.c:39:
[INFO] [stderr] warning: htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:93:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/textutils_internal.h:236:29: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: htslib/hfile_libcurl.c: In function 'share_lock':
[INFO] [stderr] warning: htslib/hfile_libcurl.c:256:30: warning: unused parameter 'handle' [-Wunused-parameter]
[INFO] [stderr] warning:   256 | static void share_lock(CURL *handle, curl_lock_data data,
[INFO] [stderr] warning:       |                        ~~~~~~^~~~~~
[INFO] [stderr] warning: htslib/hfile_libcurl.c:256:53: warning: unused parameter 'data' [-Wunused-parameter]
[INFO] [stderr] warning:   256 | static void share_lock(CURL *handle, curl_lock_data data,
[INFO] [stderr] warning:       |                                      ~~~~~~~~~~~~~~~^~~~
[INFO] [stderr] warning: htslib/hfile_libcurl.c:257:41: warning: unused parameter 'access' [-Wunused-parameter]
[INFO] [stderr] warning:   257 |                        curl_lock_access access, void *userptr) {
[INFO] [stderr] warning:       |                        ~~~~~~~~~~~~~~~~~^~~~~~
[INFO] [stderr] warning: htslib/hfile_libcurl.c:257:55: warning: unused parameter 'userptr' [-Wunused-parameter]
[INFO] [stderr] warning:   257 |                        curl_lock_access access, void *userptr) {
[INFO] [stderr] warning:       |                                                 ~~~~~~^~~~~~~
[INFO] [stderr] warning: htslib/hfile_libcurl.c: In function 'share_unlock':
[INFO] [stderr] warning: htslib/hfile_libcurl.c:261:32: warning: unused parameter 'handle' [-Wunused-parameter]
[INFO] [stderr] warning:   261 | static void share_unlock(CURL *handle, curl_lock_data data, void *userptr) {
[INFO] [stderr] warning:       |                          ~~~~~~^~~~~~
[INFO] [stderr] warning: htslib/hfile_libcurl.c:261:55: warning: unused parameter 'data' [-Wunused-parameter]
[INFO] [stderr] warning:   261 | static void share_unlock(CURL *handle, curl_lock_data data, void *userptr) {
[INFO] [stderr] warning:       |                                        ~~~~~~~~~~~~~~~^~~~
[INFO] [stderr] warning: htslib/hfile_libcurl.c:261:67: warning: unused parameter 'userptr' [-Wunused-parameter]
[INFO] [stderr] warning:   261 | static void share_unlock(CURL *handle, curl_lock_data data, void *userptr) {
[INFO] [stderr] warning:       |                                                             ~~~~~~^~~~~~~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/open_trace_file.c:81:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/open_trace_file.c: In function 'expand_path':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/misc.h:70:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
[INFO] [stderr] warning:    70 | #define MIN(A,B) ( ( (A) < (B) ) ? (A) : (B) )
[INFO] [stderr] warning:       |                          ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/open_trace_file.c:263:29: note: in expansion of macro 'MIN'
[INFO] [stderr] warning:   263 |                 path_end += MIN(strlen(file), l);
[INFO] [stderr] warning:       |                             ^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/misc.h:70:42: warning: operand of ?: changes signedness from 'long int' to 'size_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:    70 | #define MIN(A,B) ( ( (A) < (B) ) ? (A) : (B) )
[INFO] [stderr] warning:       |                                          ^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/open_trace_file.c:263:29: note: in expansion of macro 'MIN'
[INFO] [stderr] warning:   263 |                 path_end += MIN(strlen(file), l);
[INFO] [stderr] warning:       |                             ^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/misc.h:70:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
[INFO] [stderr] warning:    70 | #define MIN(A,B) ( ( (A) < (B) ) ? (A) : (B) )
[INFO] [stderr] warning:       |                          ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/open_trace_file.c:264:29: note: in expansion of macro 'MIN'
[INFO] [stderr] warning:   264 |                 file     += MIN(strlen(file), l);
[INFO] [stderr] warning:       |                             ^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/misc.h:70:42: warning: operand of ?: changes signedness from 'long int' to 'size_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:    70 | #define MIN(A,B) ( ( (A) < (B) ) ? (A) : (B) )
[INFO] [stderr] warning:       |                                          ^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/open_trace_file.c:264:29: note: in expansion of macro 'MIN'
[INFO] [stderr] warning:   264 |                 file     += MIN(strlen(file), l);
[INFO] [stderr] warning:       |                             ^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c: In function 'cram_uncompress_block':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:1010:25: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning:  1010 |         if (uncomp_size != b->uncomp_size) {
[INFO] [stderr] warning:       |                         ^~
[INFO] [stderr] warning: In file included from htslib/htslib/vcf.h:43,
[INFO] [stderr] warning:                  from wrapper.h:2,
[INFO] [stderr] warning:                  from wrapper.c:1:
[INFO] [stderr] warning: htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: htslib/htslib/hts_endian.h:245:34: warning: operand of ?: changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: htslib/htslib/hts_endian.h:257:19: warning: operand of ?: changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c: In function 'expand_cache_path':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:2021:20: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2021 |         if (cp-dir >= sz) return -1;
[INFO] [stderr] warning:       |                    ^~
[INFO] [stderr] warning: In file included from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.h:46,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning:                  from /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:73:
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/misc.h:70:26: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:    70 | #define MIN(A,B) ( ( (A) < (B) ) ? (A) : (B) )
[INFO] [stderr] warning:       |                          ^
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:2039:17: note: in expansion of macro 'MIN'
[INFO] [stderr] warning:  2039 |             l = MIN(l, strlen(fn));
[INFO] [stderr] warning:       |                 ^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/misc.h:70:36: warning: operand of ?: changes signedness from 'long int' to 'size_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning:    70 | #define MIN(A,B) ( ( (A) < (B) ) ? (A) : (B) )
[INFO] [stderr] warning:       |                                    ^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:2039:17: note: in expansion of macro 'MIN'
[INFO] [stderr] warning:  2039 |             l = MIN(l, strlen(fn));
[INFO] [stderr] warning:       |                 ^~~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:2041:23: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning:  2041 |                 if (l >= sz) return -1;
[INFO] [stderr] warning:       |                       ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c: In function 'cram_read_container':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:3008:50: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning:  3008 |     if (c2.num_landmarks < 0 || c2.num_landmarks >= SIZE_MAX / sizeof(int32_t))
[INFO] [stderr] warning:       |                                                  ^~
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c: In function 'cram_write_SAM_hdr':
[INFO] [stderr] warning: /opt/rustwide/target/debug/build/hts-sys-405cf70fbd733d47/out/htslib/cram/cram_io.c:4012:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'ssize_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr] warning:  4012 |         if (header_len != hwrite(fd->fp, sam_hdr_str(hdr), header_len))
[INFO] [stderr] warning:       |                        ^~
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 2m 01s
[INFO] running `Command { std: "docker" "inspect" "4d9cb5e48f2d4a8f576ae068d5e95592f35bad203091e2e6fabda2c0dfd9b911", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4d9cb5e48f2d4a8f576ae068d5e95592f35bad203091e2e6fabda2c0dfd9b911", kill_on_drop: false }`
[INFO] [stdout] 4d9cb5e48f2d4a8f576ae068d5e95592f35bad203091e2e6fabda2c0dfd9b911
